5JVL

3D Structure View

CAVITIES

STRUCTURE SETTINGS

LIGANDS

Bioassembly 5JVL_1

Bioassembly 5JVL_2

Chain 5JVL_A

Chain 5JVL_B

Chain 5JVL_C

Chain 5JVL_D

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GENERAL

TITLE

C4-TYPE PYRUVATE PHOSPATE DIKINASE: NUCLEOTIDE BINDING DOMAIN WITH BOUND ATP ANALOGUE

DATE LAST MODIFIED

22 Apr 2020

RELEASE

5 Apr 2017

OBSOLETE

CLASSIFICATION

TRANSFERASE

EXPERIMENT TYPE

X-RAY DIFFRACTION

SPACE GROUP

P 1

RESOLUTION RANGE HIGH

2.9

RESOLUTION RANGE LOW

PUBMED ID

DOI

10.1038/SREP45389

PDBe

LIGANDS

Target Protein	Gene	Expression System	Organism	Synonims	Actions
P0C6U8-Nsp7	PPDK, PDK	ESCHERICHIA COLI BL21(DE3)	CLUSTERED YELLOWTOPS	PYRUVATE,ORTHOPHOSPHATE DIKINASE
P22221	PPDK, PDK	ESCHERICHIA COLI BL21(DE3)	CLUSTERED YELLOWTOPS	PYRUVATE,ORTHOPHOSPHATE DIKINASE	Mutations
P0C6U8-Nsp8	PPDK, PDK	ESCHERICHIA COLI BL21(DE3)	CLUSTERED YELLOWTOPS	PYRUVATE,ORTHOPHOSPHATE DIKINASE
P0C6U8-Nsp8	PPDK, PDK	ESCHERICHIA COLI BL21(DE3)	CLUSTERED YELLOWTOPS	PYRUVATE,ORTHOPHOSPHATE DIKINASE

NGL Viewer is used for the molecular visualization.

AS Rose, AR Bradley, Y Valasatava, JM Duarte, A Prlić and PW Rose. NGL viewer: web-based molecular graphics for large complexes. Bioinformatics: bty419, 2018. doi:10.1093/bioinformatics/bty419
AS Rose and PW Hildebrand. NGL Viewer: a web application for molecular visualization. Nucl Acids Res (1 July 2015) 43 (W1): W576-W579 first published online April 29, 2015. doi:10.1093/nar/gkv402