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3D Structure View

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GENERAL
TITLE
SARS-COV-2 OMICRON VARIANT SPIKE TRIMER, ALL RBDS DOWN
DATE LAST MODIFIED
16 Mar 2022
RELEASE
9 Mar 2022
OBSOLETE
CLASSIFICATION
VIRAL PROTEIN
EXPERIMENT TYPE
ELECTRON MICROSCOPY
SPACE GROUP
P 1
RESOLUTION RANGE HIGH
2.56
RESOLUTION RANGE LOW
2.56
PUBMED ID
DOI
10.1126/SCIENCE.ABN8863
PDBe
--
LIGANDS
--

Chains

Structure ChainTarget ProteinGeneExpression SystemOrganismSynonymsActions
P0DTC2 S, 2 HOMO SAPIENS SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS S GLYCOPROTEIN,E2,PEPLOMER PROTEIN SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS
S GLYCOPROTEIN,E2,PEPLOMER PROTEIN
Mutations
P0DTC2 S, 2 HOMO SAPIENS SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS S GLYCOPROTEIN,E2,PEPLOMER PROTEIN SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS
S GLYCOPROTEIN,E2,PEPLOMER PROTEIN
Mutations
P0DTC2 S, 2 HOMO SAPIENS SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS S GLYCOPROTEIN,E2,PEPLOMER PROTEIN SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS
S GLYCOPROTEIN,E2,PEPLOMER PROTEIN
Mutations
NGL Viewer is used for the molecular visualization.
  • AS Rose, AR Bradley, Y Valasatava, JM Duarte, A Prlić and PW Rose. NGL viewer: web-based molecular graphics for large complexes. Bioinformatics: bty419, 2018. doi:10.1093/bioinformatics/bty419
  • AS Rose and PW Hildebrand. NGL Viewer: a web application for molecular visualization. Nucl Acids Res (1 July 2015) 43 (W1): W576-W579 first published online April 29, 2015. doi:10.1093/nar/gkv402