5BPH

3D Structure View

CAVITIES

STRUCTURE SETTINGS

LIGANDS

Bioassembly 5BPH_1

Bioassembly 5BPH_2

Chain 5BPH_A

Chain 5BPH_B

Chain 5BPH_C

Chain 5BPH_D

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GENERAL

TITLE

CRYSTAL STRUCTURE OF AMP COMPLEXED D-ALANINE-D-ALANINE LIGASE(DDL) FROM YERSINIA PESTIS

DATE LAST MODIFIED

RELEASE

2 Mar 2016

OBSOLETE

CLASSIFICATION

LIGASE

EXPERIMENT TYPE

X-RAY DIFFRACTION

SPACE GROUP

P 21 21 21

RESOLUTION RANGE HIGH

1.7

RESOLUTION RANGE LOW

PUBMED ID

DOI

10.1107/S2059798315021671

PDBe

LIGANDS

Target Protein	Gene	Expression System	Organism	Synonims	Actions
P30988	DDL, DDLB, YPO0557, Y3624, YP_3627	ESCHERICHIA COLI	YERSINIA PESTIS	D-ALA-D-ALA LIGASE,D-ALANYLALANINE SYNTHETASE
P62873	DDL, DDLB, YPO0557, Y3624, YP_3627	ESCHERICHIA COLI	YERSINIA PESTIS	D-ALA-D-ALA LIGASE,D-ALANYLALANINE SYNTHETASE
Q8ZIE7	DDL, DDLB, YPO0557, Y3624, YP_3627	ESCHERICHIA COLI	YERSINIA PESTIS	D-ALA-D-ALA LIGASE,D-ALANYLALANINE SYNTHETASE	Mutations
Q8ZIE7	DDL, DDLB, YPO0557, Y3624, YP_3627	ESCHERICHIA COLI	YERSINIA PESTIS	D-ALA-D-ALA LIGASE,D-ALANYLALANINE SYNTHETASE	Mutations

NGL Viewer is used for the molecular visualization.

AS Rose, AR Bradley, Y Valasatava, JM Duarte, A Prlić and PW Rose. NGL viewer: web-based molecular graphics for large complexes. Bioinformatics: bty419, 2018. doi:10.1093/bioinformatics/bty419
AS Rose and PW Hildebrand. NGL Viewer: a web application for molecular visualization. Nucl Acids Res (1 July 2015) 43 (W1): W576-W579 first published online April 29, 2015. doi:10.1093/nar/gkv402